Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ENSACLP00000004309Myocardial zonula adherens protein. (673 aa)    
Predicted Functional Partners:
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
    
  0.857
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
  0.856
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
     
  0.854
polr2g
Polymerase (RNA) II (DNA directed) polypeptide G-like.
     
  0.854
ENSACLP00000021736
Uncharacterized protein.
     
  0.854
kxd1
KxDL motif containing 1.
    
   0.721
ENSACLP00000015298
NBR1 autophagy cargo receptor b.
     
  0.711
LOC113028111
NBR1 autophagy cargo receptor a.
     
  0.711
ENSACLP00000035643
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
    
 
 0.704
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
  0.689
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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