Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rmnd5bRequired for meiotic nuclear division 5 homolog B. (391 aa)    
Predicted Functional Partners:
maea
Macrophage erythroblast attacher.
   
0.999
armc8
Armadillo repeat containing 8.
   
 0.994
LOC113031926
WD repeat domain 26a.
  
 0.991
ENSACLP00000012678
WD repeat domain 26b.
  
 0.991
gid8
GID complex subunit 8 homolog b (S. cerevisiae).
    
 0.990
ENSACLP00000020087
Muskelin 1, intracellular mediator containing kelch motifs.
    
 0.988
GID4
GID complex subunit 4 homolog.
    
 0.986
GID4-2
GID complex subunit 4 homolog.
    
 0.986
ENSACLP00000031178
RAN binding protein 10.
  
 0.985
ranbp9
RAN binding protein 9.
  
 0.980
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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