RBPMS protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

RBPMS

RNA binding protein, mRNA processing factor. (194 aa)

Predicted Functional Partners:

rbpms2

0.995

ENSACLP00000011551

0.957

QKI

0.957

LOC113024088

0.902

LOC113021216

0.902

ENSACLP00000011556

0.897

LOC113024659

0.897

LOC113031831

0.865

tbck

0.822

plac8

0.742

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000011551	ENSACLP00000011556	ENSACLP00000011551	ENSACLP00000011556	QKI, KH domain containing, RNA binding b.	Epithelial splicing regulatory protein 1.	0.603
ENSACLP00000011551	LOC113021216	ENSACLP00000011551	ENSACLP00000025518	QKI, KH domain containing, RNA binding b.	RRM domain-containing protein.	0.856
ENSACLP00000011551	LOC113024088	ENSACLP00000011551	ENSACLP00000014287	QKI, KH domain containing, RNA binding b.	RNA binding fox-1 homolog 2.	0.856
ENSACLP00000011551	LOC113024659	ENSACLP00000011551	ENSACLP00000018929	QKI, KH domain containing, RNA binding b.	Epithelial splicing regulatory protein 2.	0.603
ENSACLP00000011551	LOC113031831	ENSACLP00000011551	ENSACLP00000031576	QKI, KH domain containing, RNA binding b.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.829
ENSACLP00000011551	RBPMS	ENSACLP00000011551	ENSACLP00000004337	QKI, KH domain containing, RNA binding b.	RNA binding protein, mRNA processing factor.	0.957
ENSACLP00000011556	ENSACLP00000011551	ENSACLP00000011556	ENSACLP00000011551	Epithelial splicing regulatory protein 1.	QKI, KH domain containing, RNA binding b.	0.603
ENSACLP00000011556	QKI	ENSACLP00000011556	ENSACLP00000039815	Epithelial splicing regulatory protein 1.	QKI, KH domain containing, RNA binding 2.	0.603
ENSACLP00000011556	RBPMS	ENSACLP00000011556	ENSACLP00000004337	Epithelial splicing regulatory protein 1.	RNA binding protein, mRNA processing factor.	0.897
ENSACLP00000011556	rbpms2	ENSACLP00000011556	ENSACLP00000018710	Epithelial splicing regulatory protein 1.	RNA binding protein, mRNA processing factor 2b.	0.865
LOC113021216	ENSACLP00000011551	ENSACLP00000025518	ENSACLP00000011551	RRM domain-containing protein.	QKI, KH domain containing, RNA binding b.	0.856
LOC113021216	QKI	ENSACLP00000025518	ENSACLP00000039815	RRM domain-containing protein.	QKI, KH domain containing, RNA binding 2.	0.856
LOC113021216	RBPMS	ENSACLP00000025518	ENSACLP00000004337	RRM domain-containing protein.	RNA binding protein, mRNA processing factor.	0.902
LOC113021216	rbpms2	ENSACLP00000025518	ENSACLP00000018710	RRM domain-containing protein.	RNA binding protein, mRNA processing factor 2b.	0.886
LOC113024088	ENSACLP00000011551	ENSACLP00000014287	ENSACLP00000011551	RNA binding fox-1 homolog 2.	QKI, KH domain containing, RNA binding b.	0.856
LOC113024088	LOC113024659	ENSACLP00000014287	ENSACLP00000018929	RNA binding fox-1 homolog 2.	Epithelial splicing regulatory protein 2.	0.441
LOC113024088	QKI	ENSACLP00000014287	ENSACLP00000039815	RNA binding fox-1 homolog 2.	QKI, KH domain containing, RNA binding 2.	0.856
LOC113024088	RBPMS	ENSACLP00000014287	ENSACLP00000004337	RNA binding fox-1 homolog 2.	RNA binding protein, mRNA processing factor.	0.902
LOC113024088	rbpms2	ENSACLP00000014287	ENSACLP00000018710	RNA binding fox-1 homolog 2.	RNA binding protein, mRNA processing factor 2b.	0.886
LOC113024659	ENSACLP00000011551	ENSACLP00000018929	ENSACLP00000011551	Epithelial splicing regulatory protein 2.	QKI, KH domain containing, RNA binding b.	0.603