RBPMS protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

RBPMS

RNA binding protein, mRNA processing factor. (194 aa)

Predicted Functional Partners:

ENSACLP00000011551

0.836

QKI

0.836

rbpms2

0.754

LOC113024088

0.700

LOC113021216

0.700

LOC113031831

0.662

ENSACLP00000011556

0.612

LOC113024659

0.612

khdrbs2

0.599

LOC113011816

0.599

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000011551	ENSACLP00000011556	ENSACLP00000011551	ENSACLP00000011556	QKI, KH domain containing, RNA binding b.	Epithelial splicing regulatory protein 1.	0.466
ENSACLP00000011551	LOC113021216	ENSACLP00000011551	ENSACLP00000025518	QKI, KH domain containing, RNA binding b.	RRM domain-containing protein.	0.679
ENSACLP00000011551	LOC113024088	ENSACLP00000011551	ENSACLP00000014287	QKI, KH domain containing, RNA binding b.	RNA binding fox-1 homolog 2.	0.679
ENSACLP00000011551	LOC113024659	ENSACLP00000011551	ENSACLP00000018929	QKI, KH domain containing, RNA binding b.	Epithelial splicing regulatory protein 2.	0.466
ENSACLP00000011551	LOC113031831	ENSACLP00000011551	ENSACLP00000031576	QKI, KH domain containing, RNA binding b.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.679
ENSACLP00000011551	RBPMS	ENSACLP00000011551	ENSACLP00000004337	QKI, KH domain containing, RNA binding b.	RNA binding protein, mRNA processing factor.	0.836
ENSACLP00000011556	ENSACLP00000011551	ENSACLP00000011556	ENSACLP00000011551	Epithelial splicing regulatory protein 1.	QKI, KH domain containing, RNA binding b.	0.466
ENSACLP00000011556	QKI	ENSACLP00000011556	ENSACLP00000039815	Epithelial splicing regulatory protein 1.	QKI, KH domain containing, RNA binding 2.	0.466
ENSACLP00000011556	RBPMS	ENSACLP00000011556	ENSACLP00000004337	Epithelial splicing regulatory protein 1.	RNA binding protein, mRNA processing factor.	0.612
ENSACLP00000011556	rbpms2	ENSACLP00000011556	ENSACLP00000018710	Epithelial splicing regulatory protein 1.	RNA binding protein, mRNA processing factor 2b.	0.442
LOC113011816	LOC113021216	ENSACLP00000005865	ENSACLP00000025518	KH domain containing, RNA binding, signal transduction associated 1a.	RRM domain-containing protein.	0.402
LOC113011816	LOC113024088	ENSACLP00000005865	ENSACLP00000014287	KH domain containing, RNA binding, signal transduction associated 1a.	RNA binding fox-1 homolog 2.	0.402
LOC113011816	LOC113031831	ENSACLP00000005865	ENSACLP00000031576	KH domain containing, RNA binding, signal transduction associated 1a.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.402
LOC113011816	RBPMS	ENSACLP00000005865	ENSACLP00000004337	KH domain containing, RNA binding, signal transduction associated 1a.	RNA binding protein, mRNA processing factor.	0.599
LOC113021216	ENSACLP00000011551	ENSACLP00000025518	ENSACLP00000011551	RRM domain-containing protein.	QKI, KH domain containing, RNA binding b.	0.679
LOC113021216	LOC113011816	ENSACLP00000025518	ENSACLP00000005865	RRM domain-containing protein.	KH domain containing, RNA binding, signal transduction associated 1a.	0.402
LOC113021216	QKI	ENSACLP00000025518	ENSACLP00000039815	RRM domain-containing protein.	QKI, KH domain containing, RNA binding 2.	0.679
LOC113021216	RBPMS	ENSACLP00000025518	ENSACLP00000004337	RRM domain-containing protein.	RNA binding protein, mRNA processing factor.	0.700
LOC113021216	khdrbs2	ENSACLP00000025518	ENSACLP00000004007	RRM domain-containing protein.	KH domain containing, RNA binding, signal transduction associated 2.	0.402
LOC113021216	rbpms2	ENSACLP00000025518	ENSACLP00000018710	RRM domain-containing protein.	RNA binding protein, mRNA processing factor 2b.	0.608