Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000004344SPT20 homolog, SAGA complex component. (890 aa)    
Predicted Functional Partners:
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.998
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.998
tada2b
Transcriptional adapter.
    
 0.997
sgf29
SAGA complex associated factor 29.
    
 0.997
ENSACLP00000041154
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.997
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.996
ENSACLP00000022669
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
 0.995
supt7l
SPT7 like, STAGA complex gamma subunit.
    
 0.995
LOC113030141
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.992
ATXN7L3
Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.
    
 0.988
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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