LOC113009907 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC113009907

Uncharacterized protein. (1313 aa)

Predicted Functional Partners:

cntn2

0.749

CNTN1

0.669

cntn1

0.669

cntn5

0.669

LOC113022950

0.669

LOC113022959

0.669

LOC113022960

0.669

LOC113012799

0.669

LOC113013106

0.669

nfasc

0.651

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNTN1	LOC113009907	ENSACLP00000001260	ENSACLP00000004353	Contactin 1.	Uncharacterized protein.	0.669
CNTN1	cntn1	ENSACLP00000001260	ENSACLP00000001857	Contactin 1.	Contactin 1b.	0.830
CNTN1	nfasc	ENSACLP00000001260	ENSACLP00000000593	Contactin 1.	Neurofascin homolog (chicken) a.	0.926
LOC113009907	CNTN1	ENSACLP00000004353	ENSACLP00000001260	Uncharacterized protein.	Contactin 1.	0.669
LOC113009907	LOC113012799	ENSACLP00000004353	ENSACLP00000036872	Uncharacterized protein.	Contactin 3a, tandem duplicate 1.	0.669
LOC113009907	LOC113013106	ENSACLP00000004353	ENSACLP00000037201	Uncharacterized protein.	Contactin 3a, tandem duplicate 2.	0.669
LOC113009907	LOC113022950	ENSACLP00000004353	ENSACLP00000034408	Uncharacterized protein.	Contactin 3b.	0.669
LOC113009907	LOC113022959	ENSACLP00000004353	ENSACLP00000034634	Uncharacterized protein.	Uncharacterized protein.	0.669
LOC113009907	LOC113022960	ENSACLP00000004353	ENSACLP00000034820	Uncharacterized protein.	Contactin 4.	0.669
LOC113009907	cntn1	ENSACLP00000004353	ENSACLP00000001857	Uncharacterized protein.	Contactin 1b.	0.669
LOC113009907	cntn2	ENSACLP00000004353	ENSACLP00000000829	Uncharacterized protein.	Contactin 2.	0.749
LOC113009907	cntn5	ENSACLP00000004353	ENSACLP00000033152	Uncharacterized protein.	Contactin 5.	0.669
LOC113009907	nfasc	ENSACLP00000004353	ENSACLP00000000593	Uncharacterized protein.	Neurofascin homolog (chicken) a.	0.651
LOC113012799	LOC113009907	ENSACLP00000036872	ENSACLP00000004353	Contactin 3a, tandem duplicate 1.	Uncharacterized protein.	0.669
LOC113012799	nfasc	ENSACLP00000036872	ENSACLP00000000593	Contactin 3a, tandem duplicate 1.	Neurofascin homolog (chicken) a.	0.732
LOC113013106	LOC113009907	ENSACLP00000037201	ENSACLP00000004353	Contactin 3a, tandem duplicate 2.	Uncharacterized protein.	0.669
LOC113013106	nfasc	ENSACLP00000037201	ENSACLP00000000593	Contactin 3a, tandem duplicate 2.	Neurofascin homolog (chicken) a.	0.732
LOC113022950	LOC113009907	ENSACLP00000034408	ENSACLP00000004353	Contactin 3b.	Uncharacterized protein.	0.669
LOC113022950	nfasc	ENSACLP00000034408	ENSACLP00000000593	Contactin 3b.	Neurofascin homolog (chicken) a.	0.732
LOC113022959	LOC113009907	ENSACLP00000034634	ENSACLP00000004353	Uncharacterized protein.	Uncharacterized protein.	0.669