Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113007497BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family. (420 aa)    
Predicted Functional Partners:
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.916
LOC113015268
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.916
LOC113033302
Cathepsin F; Belongs to the peptidase C1 family.
      
 0.904
ENSACLP00000035858
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
  
 
 0.855
LOC113035578
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.845
ENSACLP00000009481
PITPNM family member 3.
    
 
 0.801
PITPNM2
Phosphatidylinositol transfer protein membrane associated 2.
    
 
 0.801
PITPNM2-2
Phosphatidylinositol transfer protein membrane associated 2.
    
 
 0.801
ENSACLP00000024230
Ubiquinol-cytochrome c reductase binding protein.
   
 0.784
LOC113028171
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
  
 0.778
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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