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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113029763Uncharacterized protein. (2412 aa)    
Predicted Functional Partners:
ENSACLP00000017650
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.856
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.841
ENSACLP00000021335
Protection of telomeres 1 homolog.
    
 
 0.812
ENSACLP00000000543
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.801
cinp
Cyclin-dependent kinase 2 interacting protein.
    
 0.801
ENSACLP00000040644
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.729
LOC113008948
Aurora kinase B; Belongs to the protein kinase superfamily.
    
 
 0.703
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
    
 
 0.703
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 
 0.696
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 
 0.696
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.