Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113027059Oxysterol-binding protein; Belongs to the OSBP family. (869 aa)    
Predicted Functional Partners:
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.870
npc1
Niemann-Pick disease, type C1.
   
 0.870
ENSACLP00000003702
Golgi glycoprotein 1a.
    
   0.792
LOC113013457
Golgi glycoprotein 1b.
    
   0.792
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.763
uxs1
UDP-glucuronate decarboxylase 1.
     
 0.758
ENSACLP00000004076
Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.715
gm2a
GM2 ganglioside activator.
      
 0.660
ENSACLP00000001504
Solute carrier family 22 member 18.
   
  
 0.659
sptlc1
Serine palmitoyltransferase, long chain base subunit 1.
      
 0.658
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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