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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113027059Oxysterol-binding protein; Belongs to the OSBP family. (869 aa)    
Predicted Functional Partners:
npc1
Niemann-Pick disease, type C1.
   
 0.866
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.864
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.757
uxs1
UDP-glucuronate decarboxylase 1.
     
 0.728
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.655
ENSACLP00000007302
SREBF chaperone.
   
 0.591
ENSACLP00000023566
Ras homolog family member H.
    
  0.589
rhoq
Ras homolog family member Q.
    
  0.589
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.579
uaca
Uveal autoantigen with coiled-coil domains and ankyrin repeats b.
    
  0.534
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.