STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023467GAS domain-containing protein. (442 aa)    
Predicted Functional Partners:
coasy
CoA synthase.
    
 0.938
dnali1
Dynein, axonemal, light intermediate chain 1.
  
 
 
 0.817
ppcs
Phosphopantothenoylcysteine synthetase.
     
 0.699
ENSACLP00000005697
MAX dimerization protein MLX.
     
 0.666
pank4
Pantothenate kinase.
     
 0.648
PPCDC
Phosphopantothenoylcysteine decarboxylase.
     
 0.647
ENSACLP00000018487
Flavoprotein domain-containing protein.
     
 0.647
ENSACLP00000024362
Phosphopantothenoylcysteine decarboxylase.
     
 0.647
LOC113027660
Cytochrome c oxidase assembly factor COX19.
     
 0.647
ENSACLP00000001254
NYD-SP28 domain-containing protein.
    
 
 0.645
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.