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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113034822Heparin-binding EGF-like growth factor a. (239 aa)    
Predicted Functional Partners:
ENSACLP00000014200
Receptor protein-tyrosine kinase.
    
 0.923
LOC113010022
Receptor protein-tyrosine kinase.
    
 0.923
LOC113029559
Receptor protein-tyrosine kinase.
    
 0.923
LOC113007667
Receptor protein-tyrosine kinase.
    
 0.912
ENSACLP00000036859
Uncharacterized protein.
    
 0.912
LOC113013517
Erb-b2 receptor tyrosine kinase 3b.
    
 0.895
mmp9
Matrix metallopeptidase 9.
    
 0.878
mmp2
Matrix metallopeptidase 2.
    
  0.858
mmp14
Matrix metallopeptidase 14b (membrane-inserted).
    
 0.836
mmp15
Matrix metallopeptidase 15b.
    
 0.836
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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