ENSACLP00000004394 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000004394

Uncharacterized protein. (275 aa)

Predicted Functional Partners:

ENSACLP00000006058

0.677

LOC113015367

0.662

ENSACLP00000009309

0.626

ENSACLP00000018109

0.555

LOC113015361

0.542

anxa1

0.528

LOC113026782

0.528

anxa2

0.528

s100a14

0.520

ENSACLP00000008827

0.507

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000004394	ENSACLP00000006058	ENSACLP00000004394	ENSACLP00000006058	Uncharacterized protein.	Protein S100; Belongs to the S-100 family.	0.677
ENSACLP00000004394	ENSACLP00000008827	ENSACLP00000004394	ENSACLP00000008827	Uncharacterized protein.	NSL1 component of MIS12 kinetochore complex.	0.507
ENSACLP00000004394	ENSACLP00000009309	ENSACLP00000004394	ENSACLP00000009309	Uncharacterized protein.	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]	0.626
ENSACLP00000004394	ENSACLP00000018109	ENSACLP00000004394	ENSACLP00000018109	Uncharacterized protein.	Perilipin 6.	0.555
ENSACLP00000004394	LOC113015361	ENSACLP00000004394	ENSACLP00000015503	Uncharacterized protein.	S100 calcium binding protein U; Belongs to the S-100 family.	0.542
ENSACLP00000004394	LOC113015367	ENSACLP00000004394	ENSACLP00000014601	Uncharacterized protein.	Protein S100; Belongs to the S-100 family.	0.662
ENSACLP00000004394	LOC113026782	ENSACLP00000004394	ENSACLP00000027534	Uncharacterized protein.	Annexin.	0.528
ENSACLP00000004394	anxa1	ENSACLP00000004394	ENSACLP00000016614	Uncharacterized protein.	Annexin.	0.528
ENSACLP00000004394	anxa2	ENSACLP00000004394	ENSACLP00000037061	Uncharacterized protein.	Annexin.	0.528
ENSACLP00000004394	s100a14	ENSACLP00000004394	ENSACLP00000025401	Uncharacterized protein.	S_100 domain-containing protein; Belongs to the S-100 family.	0.520
ENSACLP00000006058	ENSACLP00000004394	ENSACLP00000006058	ENSACLP00000004394	Protein S100; Belongs to the S-100 family.	Uncharacterized protein.	0.677
ENSACLP00000006058	LOC113015361	ENSACLP00000006058	ENSACLP00000015503	Protein S100; Belongs to the S-100 family.	S100 calcium binding protein U; Belongs to the S-100 family.	0.872
ENSACLP00000006058	LOC113015367	ENSACLP00000006058	ENSACLP00000014601	Protein S100; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.880
ENSACLP00000006058	s100a14	ENSACLP00000006058	ENSACLP00000025401	Protein S100; Belongs to the S-100 family.	S_100 domain-containing protein; Belongs to the S-100 family.	0.872
ENSACLP00000008827	ENSACLP00000004394	ENSACLP00000008827	ENSACLP00000004394	NSL1 component of MIS12 kinetochore complex.	Uncharacterized protein.	0.507
ENSACLP00000009309	ENSACLP00000004394	ENSACLP00000009309	ENSACLP00000004394	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]	Uncharacterized protein.	0.626
ENSACLP00000018109	ENSACLP00000004394	ENSACLP00000018109	ENSACLP00000004394	Perilipin 6.	Uncharacterized protein.	0.555
LOC113015361	ENSACLP00000004394	ENSACLP00000015503	ENSACLP00000004394	S100 calcium binding protein U; Belongs to the S-100 family.	Uncharacterized protein.	0.542
LOC113015361	ENSACLP00000006058	ENSACLP00000015503	ENSACLP00000006058	S100 calcium binding protein U; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.872
LOC113015361	LOC113015367	ENSACLP00000015503	ENSACLP00000014601	S100 calcium binding protein U; Belongs to the S-100 family.	Protein S100; Belongs to the S-100 family.	0.964