LOC113037255 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC113037255

Guanylate cyclase activator 1g. (190 aa)

Predicted Functional Partners:

LOC113019077

0.894

ENSACLP00000035854

0.888

ENSACLP00000020243

0.882

LOC113031017

0.882

LOC113030381

0.773

guca1a

0.773

ENSACLP00000037564

0.697

LOC113026027

0.697

LOC113014284

0.683

ENSACLP00000022825

0.683

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000020243	ENSACLP00000022825	ENSACLP00000020243	ENSACLP00000022825	Protein kinase domain-containing protein.	Guanylate cyclase.	0.410
ENSACLP00000020243	ENSACLP00000035854	ENSACLP00000020243	ENSACLP00000035854	Protein kinase domain-containing protein.	Guanylate cyclase.	0.871
ENSACLP00000020243	ENSACLP00000037564	ENSACLP00000020243	ENSACLP00000037564	Protein kinase domain-containing protein.	Guanylate cyclase.	0.410
ENSACLP00000020243	LOC113014284	ENSACLP00000020243	ENSACLP00000009915	Protein kinase domain-containing protein.	Guanylate cyclase.	0.410
ENSACLP00000020243	LOC113019077	ENSACLP00000020243	ENSACLP00000028643	Protein kinase domain-containing protein.	Guanylate cyclase.	0.871
ENSACLP00000020243	LOC113026027	ENSACLP00000020243	ENSACLP00000040832	Protein kinase domain-containing protein.	Guanylate cyclase.	0.410
ENSACLP00000020243	LOC113030381	ENSACLP00000020243	ENSACLP00000000926	Protein kinase domain-containing protein.	Guanylate cyclase activator 1d.	0.919
ENSACLP00000020243	LOC113037255	ENSACLP00000020243	ENSACLP00000004401	Protein kinase domain-containing protein.	Guanylate cyclase activator 1g.	0.882
ENSACLP00000020243	guca1a	ENSACLP00000020243	ENSACLP00000029640	Protein kinase domain-containing protein.	Guanylate cyclase activator 1A.	0.944
ENSACLP00000022825	ENSACLP00000020243	ENSACLP00000022825	ENSACLP00000020243	Guanylate cyclase.	Protein kinase domain-containing protein.	0.410
ENSACLP00000022825	ENSACLP00000035854	ENSACLP00000022825	ENSACLP00000035854	Guanylate cyclase.	Guanylate cyclase.	0.410
ENSACLP00000022825	LOC113019077	ENSACLP00000022825	ENSACLP00000028643	Guanylate cyclase.	Guanylate cyclase.	0.410
ENSACLP00000022825	LOC113030381	ENSACLP00000022825	ENSACLP00000000926	Guanylate cyclase.	Guanylate cyclase activator 1d.	0.698
ENSACLP00000022825	LOC113031017	ENSACLP00000022825	ENSACLP00000020601	Guanylate cyclase.	Guanylate cyclase.	0.410
ENSACLP00000022825	LOC113037255	ENSACLP00000022825	ENSACLP00000004401	Guanylate cyclase.	Guanylate cyclase activator 1g.	0.683
ENSACLP00000022825	guca1a	ENSACLP00000022825	ENSACLP00000029640	Guanylate cyclase.	Guanylate cyclase activator 1A.	0.767
ENSACLP00000035854	ENSACLP00000020243	ENSACLP00000035854	ENSACLP00000020243	Guanylate cyclase.	Protein kinase domain-containing protein.	0.871
ENSACLP00000035854	ENSACLP00000022825	ENSACLP00000035854	ENSACLP00000022825	Guanylate cyclase.	Guanylate cyclase.	0.410
ENSACLP00000035854	ENSACLP00000037564	ENSACLP00000035854	ENSACLP00000037564	Guanylate cyclase.	Guanylate cyclase.	0.410
ENSACLP00000035854	LOC113014284	ENSACLP00000035854	ENSACLP00000009915	Guanylate cyclase.	Guanylate cyclase.	0.410