STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113007866Cytochrome P450, family 27, subfamily A, polypeptide 7; Belongs to the cytochrome P450 family. (535 aa)    
Predicted Functional Partners:
LOC113010228
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
  
 0.893
LOC113011007
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
  
0.878
LOC113037514
Cytochrome P450 family 46 subfamily A member 1.
  
 
0.878
ENSACLP00000036777
Cytochrome P450 family 46 subfamily A member 1.
  
 
0.870
LOC113037513
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
0.870
LOC113026797
Cholesterol 25-hydroxylase like 1, tandem duplicate 2; Belongs to the sterol desaturase family.
   
 0.868
LOC113027467
Cholesterol 25-hydroxylase like 1, tandem duplicate 1; Belongs to the sterol desaturase family.
   
 0.868
dhcr7
7-dehydrocholesterol reductase.
    
 0.868
ENSACLP00000038487
Cholesterol 25-hydroxylase like 2; Belongs to the sterol desaturase family.
   
 0.868
ENSACLP00000003943
Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family.
   
 0.867
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.