STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004444Uncharacterized protein. (1526 aa)    
Predicted Functional Partners:
ENSACLP00000008539
Uncharacterized protein.
    
0.999
RIMS2
Regulating synaptic membrane exocytosis 2.
    
0.999
rims3
Regulating synaptic membrane exocytosis 3.
    
 0.763
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 0.763
ENSACLP00000020902
Regulating synaptic membrane exocytosis 1a.
    
 0.763
ENSACLP00000008624
Regulating synaptic membrane exocytosis 2b.
    
 0.760
LOC113022174
Regulating synaptic membrane exocytosis 4.
    
 0.725
LOC113035076
Solute carrier family 18 member 3a.
     
 0.711
stxbp1
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.707
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.699
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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