STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022594Nuclear receptor subfamily 1, group D, member 4b. (587 aa)    
Predicted Functional Partners:
ENSACLP00000010348
Nuclear receptor corepressor 1.
    
 0.930
ncor2
Nuclear receptor corepressor 2.
    
 0.930
ENSACLP00000021018
Uncharacterized protein.
    
 0.889
ENSACLP00000028814
Uncharacterized protein.
    
 0.889
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.721
LOC113031463
Nuclear receptor subfamily 1, group D, member 2a.
  
0.526
LOC113014232
Nuclear receptor subfamily 1, group D, member 2b.
  
0.520
ENSACLP00000009920
Nuclear receptor subfamily 1, group D, member 4a.
  
0.514
ENSACLP00000032145
D site albumin promoter binding protein b.
  
 
 0.488
per1
Period circadian clock 1b.
   
 
 0.478
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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