Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
LOC113022594Nuclear receptor subfamily 1, group D, member 4b. (587 aa)    
Predicted Functional Partners:
ENSACLP00000032145
D site albumin promoter binding protein b.
  
 0.920
ENSACLP00000010348
Nuclear receptor corepressor 1.
    
 0.910
ncor2
Nuclear receptor corepressor 2.
    
 0.910
ENSACLP00000024433
D site albumin promoter binding protein a.
   
 0.904
ENSACLP00000015166
Neuronal PAS domain protein 2.
    
 0.888
ENSACLP00000015921
Clock circadian regulator b.
    
 0.888
CLOCK
Clock circadian regulator a.
    
 0.888
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.880
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
    
 0.880
ARNTL2-2
Aryl hydrocarbon receptor nuclear translocator-like protein 2.
    
 0.880
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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