Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000004461C-type lectin domain-containing protein. (171 aa)    
Predicted Functional Partners:
COLEC12
Collectin subfamily member 12.
     
  0.835
mrc2
Mannose receptor, C type 2.
     
  0.808
ENSACLP00000032089
Phospholipase A2 receptor 1.
     
  0.808
LOC113032860
Collectin subfamily member 10.
     
  0.779
colec11
Collectin sub-family member 11.
     
  0.779
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
     
  0.734
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
     
  0.734
tyrobp
Uncharacterized protein.
    
 0.608
LOC113014197
Uncharacterized protein.
    
  0.583
ENSACLP00000001809
Reverse transcriptase domain-containing protein.
    
  0.506
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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