STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113034835RUN and FYVE domain containing 1. (718 aa)    
Predicted Functional Partners:
rab4a
RAB4a, member RAS oncogene family.
    
 0.913
rab4b
RAB4B, member RAS oncogene family.
    
 0.901
rufy2
RUN and FYVE domain containing 2.
  
 
  
0.757
LOC113033143
Uncharacterized protein.
    
 0.744
LOC113025713
Uncharacterized protein.
    
 0.744
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.727
itk
Tyrosine-protein kinase.
    
  0.720
btk
Tyrosine-protein kinase.
    
  0.720
tec
Tyrosine-protein kinase.
    
  0.720
ENSACLP00000022547
Protein kinase domain-containing protein.
    
  0.713
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.