STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004496Multimerin 2a. (1089 aa)    
Predicted Functional Partners:
clec14a
C-type lectin domain-containing protein.
   
 0.742
ENSACLP00000030449
Uncharacterized protein.
   
 0.742
vat1l
Vesicle amine transport 1-like.
    
 
 0.719
LOC113031870
Melanocortin 5b receptor.
      
 0.713
fkbpl
FKBP prolyl isomerase like.
   
 0.708
ENSACLP00000029872
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.702
cdh5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 0.694
ctif
CBP80/20-dependent translation initiation factor.
      
 0.632
ENSACLP00000039582
COMM domain containing 6.
    
 0.627
ENSACLP00000018508
Melanocortin 4 receptor.
      
 0.614
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.