LOC113032369 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC113032369

Uncharacterized protein. (190 aa)

Predicted Functional Partners:

ENSACLP00000018503

0.776

nudcd1

0.766

ENSACLP00000022648

0.650

ENSACLP00000028000

0.641

LOC113028332

0.616

LOC113029340

0.616

LOC113035020

0.616

LOC113011213

0.616

ankrd40

0.599

LOC113028313

0.599

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000018503	LOC113032369	ENSACLP00000018503	ENSACLP00000004504	Calpastatin.	Uncharacterized protein.	0.776
ENSACLP00000022648	LOC113032369	ENSACLP00000022648	ENSACLP00000004504	Nitric oxide associated 1.	Uncharacterized protein.	0.650
ENSACLP00000028000	LOC113032369	ENSACLP00000028000	ENSACLP00000004504	Programmed cell death 6 interacting protein.	Uncharacterized protein.	0.641
LOC113011213	LOC113032369	ENSACLP00000023226	ENSACLP00000004504	Annexin.	Uncharacterized protein.	0.616
LOC113028313	LOC113032369	ENSACLP00000006998	ENSACLP00000004504	SEC31 homolog B, COPII coat complex component.	Uncharacterized protein.	0.599
LOC113028332	LOC113032369	ENSACLP00000009217	ENSACLP00000004504	Annexin.	Uncharacterized protein.	0.616
LOC113029340	LOC113032369	ENSACLP00000012366	ENSACLP00000004504	Annexin.	Uncharacterized protein.	0.616
LOC113032369	ENSACLP00000018503	ENSACLP00000004504	ENSACLP00000018503	Uncharacterized protein.	Calpastatin.	0.776
LOC113032369	ENSACLP00000022648	ENSACLP00000004504	ENSACLP00000022648	Uncharacterized protein.	Nitric oxide associated 1.	0.650
LOC113032369	ENSACLP00000028000	ENSACLP00000004504	ENSACLP00000028000	Uncharacterized protein.	Programmed cell death 6 interacting protein.	0.641
LOC113032369	LOC113011213	ENSACLP00000004504	ENSACLP00000023226	Uncharacterized protein.	Annexin.	0.616
LOC113032369	LOC113028313	ENSACLP00000004504	ENSACLP00000006998	Uncharacterized protein.	SEC31 homolog B, COPII coat complex component.	0.599
LOC113032369	LOC113028332	ENSACLP00000004504	ENSACLP00000009217	Uncharacterized protein.	Annexin.	0.616
LOC113032369	LOC113029340	ENSACLP00000004504	ENSACLP00000012366	Uncharacterized protein.	Annexin.	0.616
LOC113032369	LOC113035020	ENSACLP00000004504	ENSACLP00000019989	Uncharacterized protein.	Annexin.	0.616
LOC113032369	ankrd40	ENSACLP00000004504	ENSACLP00000003655	Uncharacterized protein.	Ankyrin repeat domain 40.	0.599
LOC113032369	nudcd1	ENSACLP00000004504	ENSACLP00000000546	Uncharacterized protein.	NudC domain containing 1.	0.766
LOC113035020	LOC113032369	ENSACLP00000019989	ENSACLP00000004504	Annexin.	Uncharacterized protein.	0.616
ankrd40	LOC113032369	ENSACLP00000003655	ENSACLP00000004504	Ankyrin repeat domain 40.	Uncharacterized protein.	0.599
nudcd1	LOC113032369	ENSACLP00000000546	ENSACLP00000004504	NudC domain containing 1.	Uncharacterized protein.	0.766