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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnnc1Troponin C type 1b (slow). (203 aa)    
Predicted Functional Partners:
ENSACLP00000011933
Troponin I type 1a (skeletal, slow).
   
 0.988
ENSACLP00000034147
Troponin I type 1b (skeletal, slow).
   
 0.988
ENSACLP00000003075
Troponin I4b, tandem duplicate 2.
   
 0.960
ENSACLP00000003528
Troponin I4b, tandem duplicate 2.
   
 0.960
ENSACLP00000003586
Troponin I4a.
   
 0.960
ENSACLP00000002816
Uncharacterized protein.
   
 0.959
ENSACLP00000004453
Uncharacterized protein.
   
 0.959
ENSACLP00000012012
Troponin T type 2a (cardiac).
   
 0.959
ENSACLP00000034083
Troponin T type 2b (cardiac).
   
 0.959
LOC113025100
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
   
 0.923
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.