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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004552Solute carrier family 33 member 1. (601 aa)    
Predicted Functional Partners:
LOC113030206
Malate synthase-like.
  
 0.887
ENSACLP00000008344
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.859
b4galnt1
Beta-1,4-N-acetyl-galactosaminyl transferase 1b.
     
 0.859
LOC113031405
Cytochrome b5 reductase 4.
    
  0.822
LOC113027453
DnaJ heat shock protein family (Hsp40) member B9a.
  
   0.761
dnajb9
DnaJ heat shock protein family (Hsp40) member B9b.
  
   0.761
ENSACLP00000020084
Lipoxygenase homology domains 1b.
    
  0.710
ENSACLP00000041505
Lipoxygenase homology domains 1a.
    
  0.710
ENSACLP00000002784
J domain-containing protein.
  
   0.687
LOC113014802
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.612
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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