Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113027786Mbt domain containing 1. (726 aa)    
Predicted Functional Partners:
mrgbp
MRG/MORF4L binding protein.
    
 
 0.932
RING1
Ring finger protein 1.
    
 0.930
ENSACLP00000033001
Ring finger protein 2.
    
 0.930
tfdp1
Transcription factor.
   
 0.927
pcgf1
Polycomb group ring finger 1.
    
 0.925
pcgf6
Polycomb group ring finger 6.
    
 0.925
LOC113011647
BHLH domain-containing protein.
   
 0.907
ENSACLP00000039435
Uncharacterized protein.
   
 0.907
wdr5
WD repeat domain 5.
    
 
 0.885
MAX
MYC associated factor X.
    
 0.882
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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