Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008663Transmembrane 7 superfamily member 3. (565 aa)    
Predicted Functional Partners:
LOC113022825
TAFA chemokine like family member 4b.
    
   0.723
lxn
Latexin.
      
 0.662
LOC113025499
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
  0.639
mrps35
Mitochondrial ribosomal protein S35.
      
 0.626
ints13
Integrator complex subunit 13.
      
 0.609
mgll
Monoglyceride lipase.
   
 0.596
lypla1
Lysophospholipase 1.
     
 0.552
lypla2
Lysophospholipase 2.
     
 0.552
ndfip2
Nedd4 family interacting protein 2.
      
 0.529
ECHDC1
Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.500
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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