STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113010545G_PROTEIN_RECEP_F1_2 domain-containing protein. (416 aa)    
Predicted Functional Partners:
LOC113020908
Relaxin 3a.
    
 0.925
rln3
Relaxin 3b.
    
 0.887
LOC113009430
IlGF domain-containing protein.
    
 0.879
LOC113010670
IlGF domain-containing protein.
    
 0.850
LOC113016248
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.748
ENSACLP00000011806
IlGF domain-containing protein.
    
 0.678
LOC113013062
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
    
 0.633
LOC113022290
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
    
 0.633
ENSACLP00000005906
Relaxin family peptide receptor 2a.
     
 0.607
ENSACLP00000017254
Relaxin family peptide receptor 1.
     
 0.607
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.