Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl8Kelch-like family member 8. (614 aa)    
Predicted Functional Partners:
LOC113036190
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.969
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.969
sqstm1
Sequestosome 1.
    
 0.770
ENSACLP00000016354
Small nuclear ribonucleoprotein 70 (U1).
    
   0.754
SNRNP35-2
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
   0.754
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
   0.754
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.748
ENSACLP00000009326
Zinc finger protein 511.
    
 
 0.739
fbxo38
F-box protein 38.
   
  
 0.728
bbs9
Bardet-Biedl syndrome 9.
   
 0.719
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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