STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008666FGFR1 oncogene partner 2. (224 aa)    
Predicted Functional Partners:
slmap
Sarcolemma associated protein a.
    
 
 0.904
LOC113007291-2
MOB family member 4, phocein.
    
 
 0.900
LOC113013057
Uncharacterized protein.
    
 
 0.871
LOC113013165
Sarcolemma associated protein b.
    
 
 0.854
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
     
 0.833
tbk1
TANK-binding kinase 1.
     
 0.833
ENSACLP00000004817
Striatin interacting protein 2.
    
 
 0.825
strip1
Striatin interacting protein 1.
    
 
 0.825
LOC113036120
Programmed cell death 10a.
    
 
 0.787
LOC113012279
Programmed cell death 10b.
    
 
 0.787
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.