Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
shld2Si:ch211-134m17.9. (753 aa)    
Predicted Functional Partners:
mad2l2
Mitotic arrest deficient 2 like 2.
    
 
 0.963
LOC113034173
Uncharacterized protein.
    
 
 0.928
paxx
Uncharacterized protein.
  
   
 0.605
ENSACLP00000005062
Heterogeneous nuclear ribonucleoprotein H1.
    
 
 0.578
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
    
 
 0.578
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.560
rev3l
REV3 like, DNA directed polymerase zeta catalytic subunit.
      
 0.537
ENSACLP00000007406
Exonuclease 1.
      
 0.524
dna2
DNA replication helicase/nuclease 2.
      
 0.511
palb2
PALB2_WD40 domain-containing protein.
      
 0.510
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.