STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpreReceptor-type tyrosine-protein phosphatase. (695 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
   
 0.890
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.788
ENSACLP00000027049
SLIT and NTRK-like family, member 2.
    
 0.723
ptpra
Receptor-type tyrosine-protein phosphatase alpha.
  
 
  
0.687
lrfn5
Leucine rich repeat and fibronectin type III domain containing 5a.
    
 0.666
LOC113006909
Leucine rich repeat and fibronectin type III domain containing 5b.
    
 0.666
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
  0.654
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.654
LOC113035014
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.654
ENSACLP00000002257
Neurotrophic tyrosine kinase, receptor, type 2b.
    
 0.628
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.