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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfxapRegulatory factor X-associated protein. (213 aa)    
Predicted Functional Partners:
ENSACLP00000014649
RFX-type winged-helix domain-containing protein.
    
 0.989
ENSACLP00000014673
Regulatory factor X, 5.
    
 0.989
rfxank
Regulatory factor X-associated ankyrin-containing protein.
    
 0.981
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.960
ciita
NACHT domain-containing protein.
     
 0.932
RFX7
Regulatory factor X7.
    
 0.863
LOC113026605
Regulatory factor X7b.
    
 0.863
rfx4
Regulatory factor X, 4.
    
 0.848
ENSACLP00000002595
Regulatory factor X, 1a (influences HLA class II expression).
    
 0.837
rfx2
Regulatory factor X, 2 (influences HLA class II expression).
    
 0.837
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.