Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rfxapRegulatory factor X-associated protein. (213 aa)    
Predicted Functional Partners:
rfxank
Regulatory factor X-associated ankyrin-containing protein.
    
 0.999
ENSACLP00000014649
RFX-type winged-helix domain-containing protein.
    
 0.995
ENSACLP00000014673
Regulatory factor X, 5.
    
 0.995
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.983
ciita
NACHT domain-containing protein.
     
 0.965
RFX7
Regulatory factor X7.
    
 0.934
LOC113026605
Regulatory factor X7b.
    
 0.934
rfx4
Regulatory factor X, 4.
    
 0.875
ENSACLP00000002595
Regulatory factor X, 1a (influences HLA class II expression).
    
 0.844
rfx2
Regulatory factor X, 2 (influences HLA class II expression).
    
 0.844
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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