Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113010001UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (238 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.934
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.931
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.926
RPS27A
Ribosomal protein S27a.
    
 0.918
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.904
trip12
Thyroid hormone receptor interactor 12.
    
 0.902
rnf7
Ring finger protein 7.
   
 0.895
uba6
Ubiquitin like modifier activating enzyme 6.
   
 0.889
ENSACLP00000009605
Ubiquitin B.
    
 0.887
LOC113030103
Uncharacterized protein.
    
 0.887
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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