Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
isg20l2Interferon stimulated exonuclease gene 20 like 2. (356 aa)    
Predicted Functional Partners:
ddx24
DEAD (Asp-Glu-Ala-Asp) box helicase 24.
  
 0.880
rbm28
RNA binding motif protein 28.
   
   0.828
cebpz
CCAAT enhancer binding protein zeta.
   
 
 0.806
ENSACLP00000036883
NOP58 ribonucleoprotein homolog (yeast).
   
 
 0.799
wdr18
WD repeat domain 18.
  
  0.798
ENSACLP00000037944
Ribosomal protein L8.
   
  0.797
pan3
PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]
    
 0.772
rpl7l1
Ribosomal protein L7-like 1.
   
 0.766
rpl7
Ribosomal protein L7.
   
 0.766
ENSACLP00000037832
Uncharacterized protein.
   
 0.766
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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