STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
colqCollagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase. (457 aa)    
Predicted Functional Partners:
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.650
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.559
ENSACLP00000008297
DUF4062 domain-containing protein.
    
  0.546
lig1
DNA ligase.
    
 0.544
ENSACLP00000026996
VWFA domain-containing protein.
   
 0.531
LOC113022203
C1q domain-containing protein.
    
 
0.511
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
  0.507
LOC113010710
Collagen, type VI, alpha 2.
  
 
0.487
LOC113007686
Uncharacterized protein.
  
 
0.485
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.458
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.