ENSACLP00000004649 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSACLP00000004649

Uncharacterized protein. (1542 aa)

Predicted Functional Partners:

ENSACLP00000008539

0.976

RIMS2

0.976

rims3

0.839

RIMS1

0.839

ENSACLP00000020902

0.839

ENSACLP00000008624

0.797

snap25

0.722

LOC113006585

0.722

LOC113034107

0.722

LOC113020138

0.722

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000004649	ENSACLP00000008539	ENSACLP00000004649	ENSACLP00000008539	Uncharacterized protein.	Uncharacterized protein.	0.976
ENSACLP00000004649	ENSACLP00000008624	ENSACLP00000004649	ENSACLP00000008624	Uncharacterized protein.	Regulating synaptic membrane exocytosis 2b.	0.797
ENSACLP00000004649	ENSACLP00000020902	ENSACLP00000004649	ENSACLP00000020902	Uncharacterized protein.	Regulating synaptic membrane exocytosis 1a.	0.839
ENSACLP00000004649	LOC113006585	ENSACLP00000004649	ENSACLP00000020748	Uncharacterized protein.	Syntaxin 3A; Belongs to the syntaxin family.	0.722
ENSACLP00000004649	LOC113020138	ENSACLP00000004649	ENSACLP00000023456	Uncharacterized protein.	Syntaxin 1B; Belongs to the syntaxin family.	0.722
ENSACLP00000004649	LOC113034107	ENSACLP00000004649	ENSACLP00000022382	Uncharacterized protein.	Syntaxin 2b; Belongs to the syntaxin family.	0.722
ENSACLP00000004649	RIMS1	ENSACLP00000004649	ENSACLP00000011741	Uncharacterized protein.	Regulating synaptic membrane exocytosis 1.	0.839
ENSACLP00000004649	RIMS2	ENSACLP00000004649	ENSACLP00000037307	Uncharacterized protein.	Regulating synaptic membrane exocytosis 2.	0.976
ENSACLP00000004649	rims3	ENSACLP00000004649	ENSACLP00000002564	Uncharacterized protein.	Regulating synaptic membrane exocytosis 3.	0.839
ENSACLP00000004649	snap25	ENSACLP00000004649	ENSACLP00000012064	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.722
ENSACLP00000008539	ENSACLP00000004649	ENSACLP00000008539	ENSACLP00000004649	Uncharacterized protein.	Uncharacterized protein.	0.976
ENSACLP00000008539	ENSACLP00000008624	ENSACLP00000008539	ENSACLP00000008624	Uncharacterized protein.	Regulating synaptic membrane exocytosis 2b.	0.914
ENSACLP00000008539	LOC113006585	ENSACLP00000008539	ENSACLP00000020748	Uncharacterized protein.	Syntaxin 3A; Belongs to the syntaxin family.	0.644
ENSACLP00000008539	LOC113020138	ENSACLP00000008539	ENSACLP00000023456	Uncharacterized protein.	Syntaxin 1B; Belongs to the syntaxin family.	0.644
ENSACLP00000008539	LOC113034107	ENSACLP00000008539	ENSACLP00000022382	Uncharacterized protein.	Syntaxin 2b; Belongs to the syntaxin family.	0.644
ENSACLP00000008539	RIMS2	ENSACLP00000008539	ENSACLP00000037307	Uncharacterized protein.	Regulating synaptic membrane exocytosis 2.	0.707
ENSACLP00000008539	rims3	ENSACLP00000008539	ENSACLP00000002564	Uncharacterized protein.	Regulating synaptic membrane exocytosis 3.	0.857
ENSACLP00000008539	snap25	ENSACLP00000008539	ENSACLP00000012064	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.678
ENSACLP00000008624	ENSACLP00000004649	ENSACLP00000008624	ENSACLP00000004649	Regulating synaptic membrane exocytosis 2b.	Uncharacterized protein.	0.797
ENSACLP00000008624	ENSACLP00000008539	ENSACLP00000008624	ENSACLP00000008539	Regulating synaptic membrane exocytosis 2b.	Uncharacterized protein.	0.914