Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000004684Doublecortin-like kinase 1a. (749 aa)    
Predicted Functional Partners:
dcx
Uncharacterized protein.
   
 
 0.939
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.825
ENSACLP00000021335
Protection of telomeres 1 homolog.
    
 
 0.764
pla2g4a
Phospholipase A2.
     
 0.716
lgr5
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.650
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
    
 0.650
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.634
psmd3
Proteasome 26S subunit, non-ATPase 3.
   
 
 0.620
pank2
Pantothenate kinase 2.
    
 
 0.618
LOC113035058
Pantothenate kinase 1a.
    
 
 0.618
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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