Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113012227Zinc finger and BTB domain containing 42. (530 aa)    
Predicted Functional Partners:
ENSACLP00000021001
F-box and leucine-rich repeat protein 17.
    
   0.794
LOC113014806
Zinc finger protein 516.
    
  0.664
ENSACLP00000032833
Uncharacterized protein.
    
  0.664
LOC113015519
Uncharacterized protein.
    
 
 0.634
ENSACLP00000024895
Zinc finger and BTB domain containing 3.
    
   0.629
LOC113028287
Uncharacterized protein.
    
   0.613
LOC113035943
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
   0.613
CTBP1
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
   0.613
LOC113034916
Uncharacterized protein.
    
   0.613
cct3
T-complex protein 1 subunit gamma.
    
   0.607
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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