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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clrn3Clarin 3. (231 aa)    
Predicted Functional Partners:
elmo2
Engulfment and cell motility 2.
    
 0.821
LOC113027161
Engulfment and cell motility 3.
    
 0.821
LOC113015157
Engulfment and cell motility 1.
    
 0.821
LOC113036661
CRK proto-oncogene, adaptor protein.
    
 0.819
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.819
LOC113030677
Uncharacterized protein.
    
 0.819
LOC113030358
Transmembrane and immunoglobulin domain containing 1.
   
  
 0.609
rnf24
Ring finger protein 24.
      
 0.538
ENSACLP00000038083
ANK_REP_REGION domain-containing protein.
    
 
 0.536
ubox5
U-box domain containing 5.
      
 0.535
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.