ENSACLP00000004726 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000004726

Uncharacterized protein. (615 aa)

Predicted Functional Partners:

LOC113034294

0.952

LOC113031621

0.952

LOC113016185

0.947

LOC113016583

0.947

LOC113011118

0.947

ENSACLP00000027762

0.929

LOC113006999

0.899

rab11fip2

0.872

LOC113036439

0.861

LOC113037378

0.861

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000004726	ENSACLP00000027762	ENSACLP00000004726	ENSACLP00000027762	Uncharacterized protein.	Uncharacterized protein.	0.929
ENSACLP00000004726	LOC113006999	ENSACLP00000004726	ENSACLP00000023565	Uncharacterized protein.	EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.899
ENSACLP00000004726	LOC113011118	ENSACLP00000004726	ENSACLP00000010344	Uncharacterized protein.	Uncharacterized protein.	0.947
ENSACLP00000004726	LOC113016185	ENSACLP00000004726	ENSACLP00000007973	Uncharacterized protein.	RAB11B, member RAS oncogene family, a.	0.947
ENSACLP00000004726	LOC113016583	ENSACLP00000004726	ENSACLP00000008012	Uncharacterized protein.	Uncharacterized protein.	0.947
ENSACLP00000004726	LOC113031621	ENSACLP00000004726	ENSACLP00000015075	Uncharacterized protein.	RAB11a, member RAS oncogene family, like.	0.952
ENSACLP00000004726	LOC113034294	ENSACLP00000004726	ENSACLP00000002600	Uncharacterized protein.	RAB11a, member RAS oncogene family.	0.952
ENSACLP00000004726	LOC113036439	ENSACLP00000004726	ENSACLP00000007716	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.861
ENSACLP00000004726	LOC113037378	ENSACLP00000004726	ENSACLP00000011077	Uncharacterized protein.	EH-domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.861
ENSACLP00000004726	rab11fip2	ENSACLP00000004726	ENSACLP00000029096	Uncharacterized protein.	RAB11 family interacting protein 2 (class I).	0.872
ENSACLP00000027762	ENSACLP00000004726	ENSACLP00000027762	ENSACLP00000004726	Uncharacterized protein.	Uncharacterized protein.	0.929
ENSACLP00000027762	rab11fip2	ENSACLP00000027762	ENSACLP00000029096	Uncharacterized protein.	RAB11 family interacting protein 2 (class I).	0.858
LOC113006999	ENSACLP00000004726	ENSACLP00000023565	ENSACLP00000004726	EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.899
LOC113006999	rab11fip2	ENSACLP00000023565	ENSACLP00000029096	EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	RAB11 family interacting protein 2 (class I).	0.926
LOC113011118	ENSACLP00000004726	ENSACLP00000010344	ENSACLP00000004726	Uncharacterized protein.	Uncharacterized protein.	0.947
LOC113011118	LOC113031621	ENSACLP00000010344	ENSACLP00000015075	Uncharacterized protein.	RAB11a, member RAS oncogene family, like.	0.856
LOC113011118	LOC113034294	ENSACLP00000010344	ENSACLP00000002600	Uncharacterized protein.	RAB11a, member RAS oncogene family.	0.856
LOC113011118	rab11fip2	ENSACLP00000010344	ENSACLP00000029096	Uncharacterized protein.	RAB11 family interacting protein 2 (class I).	0.947
LOC113016185	ENSACLP00000004726	ENSACLP00000007973	ENSACLP00000004726	RAB11B, member RAS oncogene family, a.	Uncharacterized protein.	0.947
LOC113016185	LOC113031621	ENSACLP00000007973	ENSACLP00000015075	RAB11B, member RAS oncogene family, a.	RAB11a, member RAS oncogene family, like.	0.856