Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004746Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
ENSACLP00000006058
Protein S100; Belongs to the S-100 family.
    
  0.512
ENSACLP00000008827
NSL1 component of MIS12 kinetochore complex.
    
  0.507
mis12
MIS12 kinetochore complex component.
    
  0.496
traf7
TNF receptor-associated factor 7.
    
  0.474
ENSACLP00000020054
Si:dkey-6i22.5.
    
 0.473
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.471
ENSACLP00000002796
Purple acid phosphatase.
   
  0.464
gsr
Glutathione reductase.
   
  0.464
LOC113015367
Protein S100; Belongs to the S-100 family.
   
  0.464
ENSACLP00000028847
Malate dehydrogenase.
  
  0.460
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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