Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113026090Zmp:0000001301. (507 aa)    
Predicted Functional Partners:
LOC113036096
Protein phosphatase 2, regulatory subunit A, beta b.
   
 0.760
VAMP3
Vesicle associated membrane protein 3.
     
 0.727
eloc
Elongin C paralog a; Belongs to the SKP1 family.
   
  0.725
cul2
Cullin 2; Belongs to the cullin family.
    
 0.620
ENSACLP00000002778
Insulin-like growth factor 2 receptor.
    
  0.617
m6pr
Mannose-6-phosphate receptor (cation dependent).
    
  0.617
ENSACLP00000007102
RAB9B, member RAS oncogene family.
    
 0.616
RAB9A
RAB9A, member RAS oncogene family.
    
 0.616
ttc8
Tetratricopeptide repeat domain 8.
      
 0.609
LOC113006910
Aldedh domain-containing protein.
      
 0.607
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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