Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
shisa3Shisa family member 3. (285 aa)    
Predicted Functional Partners:
vopp1
VOPP1 WW domain binding protein.
      
 0.720
RGS22
Regulator of G protein signaling 22.
      
 0.712
LOC113021091
C1q and TNF related 6a.
   
  
 0.680
LOC113014398
Shisa family member 7.
      
 0.666
cfap299
Cilia and flagella associated protein 299.
      
 0.661
LOC113025704
WW domain binding protein 1.
      
 0.657
BEND4
BEN domain containing 4.
      
 0.655
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.655
slc30a9
Solute carrier family 30 member 9.
      
 0.635
shisal1
Shisa like 1b.
      
 0.614
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.