STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113013067Signal transducer and activator of transcription. (769 aa)    
Predicted Functional Partners:
jak1
Tyrosine-protein kinase.
   
 0.955
tyk2
Tyrosine-protein kinase.
   
 0.952
LOC113006843
Tyrosine-protein kinase.
   
 0.949
LOC113033249
Tyrosine-protein kinase.
   
 0.938
LOC113025906
Tyrosine-protein kinase.
   
 0.938
pias4
Protein inhibitor of activated STAT, 4a.
    
 0.898
socs5
Suppressor of cytokine signaling 5b.
    
 0.884
socs1
Suppressor of cytokine signaling 1a.
   
 0.877
irf9
Interferon regulatory factor 9.
   
 0.877
LOC113021092
Fibronectin type-III domain-containing protein.
   
 0.873
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.