Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pld4Phospholipase D family member 4. (481 aa)    
Predicted Functional Partners:
ENSACLP00000019527
Phospholipase.
     
 0.914
dgke
Diacylglycerol kinase.
     
 0.907
lpcat2
Lysophosphatidylcholine acyltransferase 2.
   
 
 0.906
LOC113016593
Phospholipid phosphatase 2b.
     
 0.890
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
     
 0.890
LOC113034151
acidPPc domain-containing protein.
     
 0.890
LOC113010966
acidPPc domain-containing protein.
     
 0.890
LOC113020604
Phosphatidic acid phosphatase type 2D.
     
 0.889
ENSACLP00000035975
acidPPc domain-containing protein.
     
 0.889
ENSACLP00000030483
Lecithin-cholesterol acyltransferase.
   
 
 0.885
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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