STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkbp14Peptidylprolyl isomerase. (211 aa)    
Predicted Functional Partners:
ptges3
Prostaglandin E synthase 3a (cytosolic).
   
 0.653
LOC113028551
Si:ch211-131k2.3.
   
 0.653
eif1ax
Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
   0.610
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.602
RYR2
Uncharacterized protein.
    
 0.580
RYR3
Ryanodine receptor 3.
    
 0.580
ENSACLP00000028224
B30.2/SPRY domain-containing protein.
    
 0.580
ENSACLP00000028261
Ins145_P3_rec domain-containing protein.
    
 0.580
ENSACLP00000030617
Ryanodine receptor 1b (skeletal).
    
 0.580
ENSACLP00000031558
Ryanodine receptor 2b (cardiac).
    
 0.580
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.