STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021715Uncharacterized protein. (188 aa)    
Predicted Functional Partners:
igf2
Insulin-like growth factor 2b.
   
 0.883
IGFBP1
Insulin like growth factor binding protein 1.
      
 0.614
igf1
Insulin-like growth factor 1.
     
 0.583
ENSACLP00000016154
SCP domain-containing protein; Belongs to the CRISP family.
   
  
 0.553
igfbp7
Insulin-like growth factor binding protein 7.
     
 0.541
LOC113035406
Opioid growth factor receptor-like 1.
      
 0.528
pappa
Pregnancy-associated plasma protein A, pappalysin 1a.
    
 0.470
tp53inp2
Uncharacterized protein.
      
 0.419
PTPN14
Protein tyrosine phosphatase non-receptor type 14.
    
 
 0.413
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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