Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004853Death effector domain containing. (452 aa)    
Predicted Functional Partners:
cnot10
CCR4-NOT transcription complex, subunit 10.
   
  
 0.727
ENSACLP00000022178
CCR4-NOT transcription complex, subunit 11.
      
 0.715
cnot6l
CCR4-NOT transcription complex, subunit 6-like.
      
 0.657
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
      
 0.656
CNOT9
CCR4-NOT transcription complex subunit 9.
      
 0.655
cnot7
CCR4-NOT transcription complex, subunit 7.
      
 0.655
cnot8
CCR4-NOT transcription complex, subunit 8.
      
 0.654
rexo2
Small fragment nuclease.
      
 0.608
eapp
E2f-associated phosphoprotein.
      
 0.605
drg2
Developmentally regulated GTP binding protein 2.
      
 0.601
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.