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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptges3Prostaglandin E synthase 3a (cytosolic). (159 aa)    
Predicted Functional Partners:
stip1
Stress-induced phosphoprotein 1.
   
 0.985
ppp5c
Serine/threonine-protein phosphatase.
    
 0.979
ppid
Peptidylprolyl isomerase D.
   
 0.976
PPIG
Peptidylprolyl isomerase G.
   
 0.975
nktr
Natural killer cell triggering receptor.
   
 0.975
ENSACLP00000001630
Uncharacterized protein.
   
 0.969
LOC113037291
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.969
LOC113037290
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.969
ENSACLP00000024753
Uncharacterized protein.
   
 0.969
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.969
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.