Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113033844Tet methylcytosine dioxygenase 3. (1937 aa)    
Predicted Functional Partners:
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 
 0.861
cxxc4
CXXC finger 4.
    
 0.853
ENSACLP00000034796
Translocase of outer mitochondrial membrane 20.
   
 
 0.773
dvl2
Dishevelled segment polarity protein 2.
    
 0.722
dvl3
Dishevelled segment polarity protein 3a.
    
 0.722
rnpepl1
Arginyl aminopeptidase like 1.
    
 0.722
ENSACLP00000027974
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.717
tdg
Thymine DNA glycosylase, tandem duplicate 1.
      
 0.716
LOC113030856
CXXC finger protein 5a.
    
 0.695
LOC113019475
CXXC-type domain-containing protein.
    
 0.695
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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