STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004883Uncharacterized protein. (86 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
 0.984
nanp
N-acetylneuraminic acid phosphatase.
     
 0.863
ENSACLP00000002769
Si:dkey-28n18.9.
   
 0.810
snx6
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.810
snx5
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.810
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.803
ENSACLP00000016397
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.800
LOC113009797
Cytidine monophospho-N-acetylneuraminic acid hydroxylase.
     
 0.702
LOC113009816
Rieske domain-containing protein.
     
 0.702
LOC113019041
Uncharacterized protein.
  
  
 
0.687
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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