LOC113012371 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC113012371

Uncharacterized protein. (1370 aa)

Predicted Functional Partners:

LOC113022989

0.768

LOC113025140

0.752

anln

0.752

LOC113015068

0.538

ENSACLP00000023060

0.538

LOC113015067

0.538

LOC113015070

0.538

LOC113031477

0.538

LOC113022754

0.451

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000023060	LOC113012371	ENSACLP00000023060	ENSACLP00000004889	Cell division cycle 42, like.	Uncharacterized protein.	0.538
ENSACLP00000023060	LOC113022754	ENSACLP00000023060	ENSACLP00000016423	Cell division cycle 42, like.	Tankyrase_bdg_C domain-containing protein.	0.830
ENSACLP00000023060	LOC113022989	ENSACLP00000023060	ENSACLP00000036531	Cell division cycle 42, like.	Cell division cycle 42.	0.835
ENSACLP00000023060	LOC113025140	ENSACLP00000023060	ENSACLP00000006539	Cell division cycle 42, like.	Si:dkey-30c15.10.	0.455
ENSACLP00000023060	anln	ENSACLP00000023060	ENSACLP00000024515	Cell division cycle 42, like.	Anillin, actin binding protein.	0.455
LOC113012371	ENSACLP00000023060	ENSACLP00000004889	ENSACLP00000023060	Uncharacterized protein.	Cell division cycle 42, like.	0.538
LOC113012371	LOC113015067	ENSACLP00000004889	ENSACLP00000023081	Uncharacterized protein.	Cell division cycle 42, like.	0.538
LOC113012371	LOC113015068	ENSACLP00000004889	ENSACLP00000023023	Uncharacterized protein.	Cell division cycle 42, like.	0.538
LOC113012371	LOC113015070	ENSACLP00000004889	ENSACLP00000023148	Uncharacterized protein.	Uncharacterized protein.	0.538
LOC113012371	LOC113022754	ENSACLP00000004889	ENSACLP00000016423	Uncharacterized protein.	Tankyrase_bdg_C domain-containing protein.	0.451
LOC113012371	LOC113022989	ENSACLP00000004889	ENSACLP00000036531	Uncharacterized protein.	Cell division cycle 42.	0.768
LOC113012371	LOC113025140	ENSACLP00000004889	ENSACLP00000006539	Uncharacterized protein.	Si:dkey-30c15.10.	0.752
LOC113012371	LOC113031477	ENSACLP00000004889	ENSACLP00000036277	Uncharacterized protein.	Uncharacterized protein.	0.538
LOC113012371	anln	ENSACLP00000004889	ENSACLP00000024515	Uncharacterized protein.	Anillin, actin binding protein.	0.752
LOC113015067	LOC113012371	ENSACLP00000023081	ENSACLP00000004889	Cell division cycle 42, like.	Uncharacterized protein.	0.538
LOC113015067	LOC113022754	ENSACLP00000023081	ENSACLP00000016423	Cell division cycle 42, like.	Tankyrase_bdg_C domain-containing protein.	0.830
LOC113015067	LOC113022989	ENSACLP00000023081	ENSACLP00000036531	Cell division cycle 42, like.	Cell division cycle 42.	0.835
LOC113015067	LOC113025140	ENSACLP00000023081	ENSACLP00000006539	Cell division cycle 42, like.	Si:dkey-30c15.10.	0.455
LOC113015067	anln	ENSACLP00000023081	ENSACLP00000024515	Cell division cycle 42, like.	Anillin, actin binding protein.	0.455
LOC113015068	LOC113012371	ENSACLP00000023023	ENSACLP00000004889	Cell division cycle 42, like.	Uncharacterized protein.	0.538