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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113012371Uncharacterized protein. (1370 aa)    
Predicted Functional Partners:
fermt2
Fermitin family member 2.
    
 0.520
ENSACLP00000024804
Fermitin family member 3b.
    
 0.520
fermt1
Fermitin family member 1.
    
 0.520
ect2
Epithelial cell transforming 2.
    
0.467
ENSACLP00000035077
Coiled-coil domain containing 28A.
    
 0.443
LOC113022754
Tankyrase_bdg_C domain-containing protein.
     
 0.438
arl14
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.434
ENSACLP00000040037
ADP-ribosylation factor-like 14.
    
 0.434
LOC113022989
Cell division cycle 42.
    
  0.431
LOC113022105
Pleckstrin homology domain containing, family A member 7b.
    
  0.426
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.