Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014945Uncharacterized protein; Belongs to the DEAD box helicase family. (487 aa)    
Predicted Functional Partners:
dcp1a
Decapping mRNA 1A.
   
 0.982
ENSACLP00000031594
Enhancer of mRNA decapping 4.
   
 0.982
dcp2
Decapping mRNA 2.
   
 0.972
LOC113009769
Decapping mRNA 1B.
   
 0.968
lsm1
U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.
   
 0.963
LOC113026647
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
   
 0.960
edc3
Uncharacterized protein.
   
 0.960
lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.954
lsm4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.945
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
  
 0.939
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.